BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D09SP1|AL428545
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig971 1614 0.0
>3x_Contig971
Length = 3245
Score = 1614 bits (801), Expect = 0.0
Identities = 836/861 (97%)
Strand = Plus / Minus
Query: 1 atgagacaaaagtggcatgtaacattataaactagacttgcattaggaaatgattatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3143 atgagacaaaagtggcatgtaacattataaactagacttgcattaggaaatgattatggc 3084
Query: 61 atacatagtgtgtatacagttttaatctataaatttmattccttcaaaatatgtgtagcc 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3083 atacatagtgtgtatacagttttaatctataaatttaattccttcaaaatatgtgtagcc 3024
Query: 121 aattccttatacatccatgtattaccagamactttcttgaaatggacaccagccaagcca 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3023 aattccttatacatccatgtattaccagaaactttcttgaaatggacaccagccaagcca 2964
Query: 181 acaagcttgaccttaacgatatgtatctcamacttcaaaggtggcctttctttattacct 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2963 acaagcttgaccttaacgatatgtatctcaaacttcaaaggtggcctttctttattacct 2904
Query: 241 gcttcattcttattgccgataacaactttmttcatatcttgtgcctttsamttagtcaat 300
||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||
Sbjct: 2903 gcttcattcttattgccgataacaactttattcatatcttgtgcctttgaattagtcaat 2844
Query: 301 atgtcctcttgattatycagagtttcgaaggatgcagtagamacttcctctaggatttgc 360
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2843 atgtcctcttgattattcagagtttcgaaggatgcagtagaaacttcctctaggatttgc 2784
Query: 361 ccagtactagtacgtggcgaagtgacagacagatttcgttcatgcgttgcagcagccaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2783 ccagtactagtacgtggcgaagtgacagacagatttcgttcatgcgttgcagcagccaga 2724
Query: 421 ggtgtggctgggattcctggttgtytgagtgaaccatgtcttctcatggsaccatgacgt 480
|||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||
Sbjct: 2723 ggtgtggctgggattcctggttgtttgagtgaaccatgtcttctaatggaaccatgacgt 2664
Query: 481 gatggtattgacaattgtcttctatgggagtytgctgttgagctgtttgaytcccatgam 540
|||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||
Sbjct: 2663 gatggtattgacaattgttttctatgggagtttgctgttgagctgtttgattccaatgaa 2604
Query: 541 gamgtttcattaatmacaatagamggmtgcctaccgtggtttggaggctgctcttgagat 600
|| ||||||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2603 gaagtttcattaataacaatagaaggatgcctaccgtggtttggaggctgctcttgagat 2544
Query: 601 acgtmagattgtctgtsacagcagataaaaccgcctttcacttctgtaaattcgatgttt 660
|||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2543 acgtaagattgtctgtgacagcagataaaaccgccttttacttctgtaaattcgatgttt 2484
Query: 661 aactttttcaacgtactaataatcttgtatctaacgacaggtaatggtttagaagatgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2483 aactttttcaacgtactaataatcttgtatctaacgacaggtaatggtttagaagatgtt 2424
Query: 721 gtttggacagagaaaaagccttthaggaataaagaacgtgggaagtcgatcgatggcatt 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2423 gtttggacagagaaaaagccttttaggaataaagaacgtgggaagtcgatcgatggcatt 2364
Query: 781 gaacctggaggagctttggatgctctttcaataatttsttcatcagttagttcttcccag 840
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2363 gaacctggaggagctttggatgctctttcaataatttgttcatcagttagttcttcccag 2304
Query: 841 ggtgatatgtcgtctatctgg 861
|||||||||||||||||||||
Sbjct: 2303 ggtgatatgtcgtctatctgg 2283
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4431
Number of Sequences: 1807
Number of extensions: 4431
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)